About

Contact US

InfoScan is under constant maintenance and improvement and is developed by the RNA Bioinformatics Facility at the Sun Yat-sen University, Qu Lab.

Any questions about the usage, comments or suggestions are appreciated.

The contact : Lingling Zheng: zhengll33@mail.sysu.edu.cn

Our Other Tools

In addition to InfoScan, we have also developed several databases and softwares to investigate the biological functions and mechanisms of various RNA in biological processes.

ColorCells

ColorCells: a database of expression, classification and functions of lncRNAs in single cells. (Zheng et al. Briefings in Bioinformatics. Volume 22, Issue 4, July 2021, bbaa325.)

ChIPBase v2.0

Decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data. (Zhou et al. Nucleic Acids Res. 2017 Jan 04;45(D1):D43-D50.)

ENCORI

A database for exploring miRNA-mRNA and miRNA-ncRNA interaction maps from Argonaute and other RBP CLIP-Seq data. (Li et al. Nucleic Acids Res. 2014;42:D92-7.)

RMBase V2.0

Deciphering the Map of RNA Modifications from Epitranscriptome Sequencing Data. (Xuan et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D327-34.)

dreamBase

DNA modification, RNA regulation and protein binding of expressed pseudogenes in human health and disease. (Zheng et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D85-D91.)

tsRFun

tsRFun: a comprehensive platform for decoding human tsRNA expression, functions and prognostic value by high-throughput small RNA-Seq and CLIP-Seq data. Jun-Hao Wang, Wen-Xin Chen, Ling-Ling Zheng*. Nucleic Acids Res. 2021.

deepBase v3.0

deepBase v3.0: expression atlas and interactive analysis of ncRNAs from thousands of deep-sequencing data. (Xie et al. Nucleic Acids Res. 2021 Jan 9;49(D1):D877–D883.)